Medical & Healthcare
Tooluniverse Gene Regulatory Networks
The skill performs comprehensive gene regulatory network analysis, inferring transcription factor–target relationships using JASPAR motifs, ChIP‑seq data, motif scanning, eQTL integration, and perturbation evidence from knockouts and overexpression studies. It distinguishes direct binding from indirect co‑expression signals, enabling researchers to identify which transcription factor regulates a specific gene, which genes a transcription factor targets, and to reconstruct regulatory pathways. This empowers molecular biologists and bioinformaticians to uncover precise regulatory mechanisms in their datasets.
- Publisher / source
- mims-harvard/ToolUniverse (found on GitHub top repositories)
- Upstream record
- mims-harvard/ToolUniverse
- Version
- Version 1
- Published
- Publication review
- Approved for publication · recorded passed scan 2026-11-11
- Content fingerprint
dd1ef084041409e6136aca8efc3a815e6ce6c55acaedffad0d578062379f3fbe