Data Science & Analytics
Gtars
Inspects and plans work with Gtars, the Rust/Python/CLI toolkit for genomic intervals: BED RegionSet set algebra (reduce, setdiff, intersect, closest, cluster, gaps), overlap counts, consensus peak sets, coverage, tokenizers, fragment processing, and refget/BEDbase stores. Use when merging or comparing BED interval sets, building a consensus or universe from peaks, tokenizing regions for ML models, working with fragment files, or planning refget sequence-collection and BEDbase cache use. Use when checking BED coordinates, contigs, or strand before running gtars. Not for general BAM/VCF processing; use samtools or bedtools for that.
- Publisher / source
- KalarisLabs/research-agent-skills (found on the CSV list)
- Upstream record
- KalarisLabs/research-agent-skills
- Version
- Version 2
- Published
- Publication review
- Approved for publication
- Content fingerprint
54f34626babfb53820325c01b6d9268dc0740c784ba61e97f901daf5a799f513