Medical & Healthcare

LigandMPNN

Inverse-fold a backbone with ligand, nucleic-acid, and metal context using LigandMPNN (Dauparas et al. 2023, github.com/dauparas/LigandMPNN). Reach for this skill to redesign the residues lining a binding pocket around a bound small molecule or cofactor, to design metal-coordinating sites where the geometry must be respected, or to get threaded designed-sequence PDBs out of any MPNN run.

Publisher / source
HughYau/AcademicForge (found on GitHub top repositories)
Upstream record
HughYau/AcademicForge
Version
Version 1
Published
Publication review
Approved for publication
Content fingerprint
004f25fe7caab394424fb7e2660b9428ad7079d0b9ff1d573079ab6340938396