Medical & Healthcare

Linking UMLS Concepts

Links entities extracted by OpenMed to UMLS Metathesaurus CUIs using the USER'S OWN UTS API key, with nothing from the Metathesaurus bundled or cached. Use when the user wants to normalize concepts across vocabularies to a single CUI, resolve synonyms via the UMLS, filter by semantic type, or cross-walk between SNOMED CT, ICD-10, RxNorm and MeSH through their shared CUI. Trigger keywords: UMLS, CUI, Metathesaurus, UTS API key, semantic type, TUI, MetaMap, QuickUMLS, concept normalization, cross-vocabulary. Pairs after OpenMed NER: consume Disease/Pharmaceutical/Chemical/Anatomy entities from openmed.analyze_text and resolve each span to a CUI out-of-process. UMLS is license-restricted — the Metathesaurus is NEVER bundled; every call uses the user's UTS account.

Publisher / source
maziyarpanahi/openmed (found on GitHub top repositories)
Upstream record
maziyarpanahi/openmed
Version
Version 1
Published
Publication review
Approved for publication · recorded passed scan 2026-11-05
Content fingerprint
fe20b72d0279bbb9cbdb9b129ac7d2194c114d7c1d34638b9b0c68313a47262f