Data Science & Analytics

Bio Workflows Somatic Variant Pipeline

name: bio-workflows-somatic-variant-pipeline description: End-to-end somatic variant calling from tumor-normal paired samples using Mutect2 or Strelka2. Covers preprocessing, variant calling, filtering, and annotation for cancer genomics. Use when calling somatic mutations from tumor-normal pairs. tool_type: cli primary_tool: GATK Mutect2 measurable_outcome: Execute skill workflow successfully with valid output within 15 minutes. allowed-tools:

Publisher / source

FreedomIntelligence/OpenClaw-Medical-Skills (found on GitHub top repositories)

Upstream record

FreedomIntelligence/OpenClaw-Medical-Skills

Version

Version 1

Published

2026-11-06

Publication review

Approved for publication

Content fingerprint

1672a7af4774289e69b62aab28eab090d6f2112112ebc1cd2467cb8a1417ca68