Medical & Healthcare
Pacsomatic
Pacsomatic provides a comprehensive operator toolkit for nf‑core/pacsomatic tumor‑normal workflows, validating BAM inputs, generating compliant sample sheets, and preparing reproducible Nextflow launch artifacts. It supports local execution or submission to LSF, Slurm, PBS, or SGE schedulers, and offers troubleshooting for pipeline startup and scheduler errors. Researchers and bioinformaticians benefit from streamlined workflow preparation, reliable execution, and rapid failure triage.
- Publisher / source
- KalarisLabs/research-agent-skills (found on the CSV list)
- Upstream record
- KalarisLabs/research-agent-skills
- Version
- Version 2
- Published
- Publication review
- Approved for publication
- Content fingerprint
5d1cf933d1912e189b7ccdea8f24832972f8f6d2666346641502a45389d220a9