Medical & Healthcare

AlterLab PyDESeq2

Run differential gene expression analysis on bulk RNA-seq count matrices with PyDESeq2, the Python port of DESeq2 — size-factor normalization, dispersion estimation, Wald tests, FDR (Benjamini-Hochberg) correction, and volcano/MA plots. Use when identifying differentially expressed genes between conditions from raw bulk RNA-seq counts. Part of the AlterLab Academic Skills suite.

Publisher / source
AlterLab-IEU/AlterLab-Academic-Skills (found on the CSV list)
Upstream record
AlterLab-IEU/AlterLab-Academic-Skills
Version
Version 2
Published
Publication review
Approved for publication
Content fingerprint
60e7715051cb0fd1109a35064e769ab54f83c01942dbc1164b8a078dd9b36221