Medical & Healthcare
Extracting Clinical Entities
Run clinical and biomedical named-entity recognition on medical text with OpenMed's analyze_text. Use when the user wants to extract diseases, drugs, anatomy, genes, or other biomedical entities from notes; needs NER output as dict/json/html/csv; wants to filter by confidence, group entities, toggle sentence detection, or save spans to JSONL; or wants the openmed analyze CLI. Pairs with loading-openmed-models and choosing-openmed-models, and runs after deidentifying-clinical-text in a privacy-first pipeline.
- Publisher / source
- maziyarpanahi/openmed (found on GitHub top repositories)
- Upstream record
- maziyarpanahi/openmed
- Version
- Version 1
- Published
- Publication review
- Approved for publication
- Content fingerprint
59394e842bd79a06fb876ecfc3c61da6e3e86c0d5a3bf3dc93f575352ecfd4dc