Data Science & Analytics
Gget
Queries 20+ bioinformatics databases and analysis services through the gget CLI and Python package, covering Ensembl gene search, info and sequences (ref, search, info, seq), BLAST, BLAT, MUSCLE, DIAMOND, PDB, AlphaFold, ELM, ARCHS4, CELLxGENE, Enrichr, Bgee, OpenTargets, cBioPortal, COSMIC, viral sequence downloads (virus), and 8cube mouse specificity and expression data. Use when looking up gene or transcript details, running a quick BLAST/BLAT search, fetching AlphaFold or PDB structures, running enrichment analysis on a gene list, downloading viral sequences with filters, or exploring disease and drug associations interactively. Not for batch processing or fine-grained BLAST control (use biopython) or multi-database Python pipelines (use bioservices).
- Publisher / source
- KalarisLabs/research-agent-skills (found on the CSV list)
- Upstream record
- KalarisLabs/research-agent-skills
- Version
- Version 2
- Published
- Publication review
- Approved for publication
- Content fingerprint
0aa4758eb076d347652697654f3ed40d218599f3f63fdd624aa65c1309bf7b7a