Data Science & Analytics
ToolUniverse Rnaseq DESeq2
Production-ready RNA-seq differential expression analysis using PyDESeq2. Performs DESeq2 normalization, dispersion estimation, Wald testing, LFC shrinkage, and result filtering. Handles multi-factor designs, multiple contrasts, batch effects, and integrates with gene enrichment (gseapy) and ToolUniverse annotation tools (UniProt, Ensembl, OpenTargets). Supports CSV/TSV/H5AD input formats and any organism. Use when analyzing RNA-seq count matrices, identifying DEGs, performing differential expression with statistical rigor, or answering questions about gene expression changes.
- Publisher / source
- FreedomIntelligence/OpenClaw-Medical-Skills (found on GitHub top repositories)
- Upstream record
- FreedomIntelligence/OpenClaw-Medical-Skills
- Version
- Version 1
- Published
- Publication review
- Approved for publication
- Content fingerprint
8aee4546f747d0e85d39a2a0a654207289b03a4776d82b507040786bbefef4c7