Medical & Healthcare
scVI Tools
Probabilistic single-cell RNA-seq with scvi-tools — scVI for a batch-corrected latent space, scANVI for semi-supervised label transfer, and Bayesian differential expression. Reach for this skill to integrate scRNA-seq batches, embed cells for clustering, transfer annotations from a reference onto a query, or score differentially expressed genes per cluster. For spatial deconvolution / mapping use the cell2location, DestVI, or Tangram methods instead.
- Publisher / source
- aipoch/open-science (found on GitHub top repositories)
- Upstream record
- aipoch/open-science
- Version
- Version 1
- Published
- Publication review
- Approved for publication
- Content fingerprint
27779ca65ae12363dc7e60d40320d2e9d19085c3f8cf7ba016c3a2e4b799bf96