Medical & Healthcare
Extracting Lab Tables
Detects and extracts tabular laboratory panels from PDFs, scans, and images into structured rows ready for OpenMed and FHIR. Use when the user has a CBC, CMP, lipid panel, or other lab report as a scanned image / PDF / spreadsheet and needs the test name, value, unit, reference range, and abnormal flag as clean rows. Trigger keywords: lab table extraction, lab panel, OCR labs, table detection, layout analysis, header detection, reference range column, abnormal flag column, LOINC, UCUM, CBC, CMP, structured labs. Pairs before OpenMed: OCR/parse the table on-device (openmed.multimodal.ocr.ocr, read_table), de-identify embedded PHI with openmed.deidentify, then hand structured rows to LOINC/UCUM mapping and openmed.clinical lab flagging. Image/CSV/TSV intake is supported; PDF/DOCX raise UnsupportedDocumentError — render those to images or text first.
- Publisher / source
- maziyarpanahi/openmed (found on GitHub top repositories)
- Upstream record
- maziyarpanahi/openmed
- Version
- Version 1
- Published
- Publication review
- Approved for publication
- Content fingerprint
231ad52cc6a59f83b9abe63423048e8867e95b0dbc10ec12a74623180c57ac19