Data Science & Analytics

Tooluniverse Proteomics Data Retrieval

Find and retrieve proteomics datasets from MassIVE, ProteomeXchange, PRIDE Archive, and the NCI Proteomics Data Commons (PDC). Search by species, keyword, accession, or protein; retrieve detailed metadata (instruments, publications, species, PTMs studied), real file-download URLs (PRIDE), or quantitative abundance matrices with clinical linkage (PDC/CPTAC). Use for locating public proteomics datasets to reanalyze, comparing instrument/protocol coverage across studies, pre-download dataset evaluation, and finding every dataset that identified a specific protein.

Publisher / source
mims-harvard/ToolUniverse (found on GitHub top repositories)
Upstream record
mims-harvard/ToolUniverse
Version
Version 1
Published
Publication review
Approved for publication
Content fingerprint
ba2b399ae071d548ef5c748eb1a8d4ee5152c143d4d89612e1f2559bce4c3e33